truC protein (Providencia rettgeri) - STRING interaction network

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truC

tRNA pseudouridine synthase C. (253 aa)

Predicted Functional Partners:

yqcC

0.890

cysJ_3

0.807

rplQ

0.489

rplC

0.481

truD

0.467

APC13209.1

0.455

obgE

0.432

rsuA

0.423

truB

0.412

Your Current Organism:

Providencia rettgeri

NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC13209.1	cysJ_3	RB151_035570	RB151_035540	Hypothetical protein.	Sulfite reductase [NADPH] flavoprotein alpha-component.	0.434
APC13209.1	truC	RB151_035570	RB151_035550	Hypothetical protein.	tRNA pseudouridine synthase C.	0.455
APC13209.1	yqcC	RB151_035570	RB151_035560	Hypothetical protein.	Hypothetical protein.	0.455
cysJ_3	APC13209.1	RB151_035540	RB151_035570	Sulfite reductase [NADPH] flavoprotein alpha-component.	Hypothetical protein.	0.434
cysJ_3	truC	RB151_035540	RB151_035550	Sulfite reductase [NADPH] flavoprotein alpha-component.	tRNA pseudouridine synthase C.	0.807
cysJ_3	yqcC	RB151_035540	RB151_035560	Sulfite reductase [NADPH] flavoprotein alpha-component.	Hypothetical protein.	0.831
obgE	rplC	RB151_041180	RB151_042810	GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.895
obgE	rplQ	RB151_041180	RB151_042550	GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L17.	0.911
obgE	truB	RB151_041180	RB151_041030	GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.420
obgE	truC	RB151_041180	RB151_035550	GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	tRNA pseudouridine synthase C.	0.432
rplC	obgE	RB151_042810	RB151_041180	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.895
rplC	rplQ	RB151_042810	RB151_042550	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L17.	0.998
rplC	truB	RB151_042810	RB151_041030	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.580
rplC	truC	RB151_042810	RB151_035550	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	tRNA pseudouridine synthase C.	0.481
rplC	truD	RB151_042810	RB151_034890	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.604
rplQ	obgE	RB151_042550	RB151_041180	50S ribosomal protein L17.	GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.911
rplQ	rplC	RB151_042550	RB151_042810	50S ribosomal protein L17.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.998
rplQ	truB	RB151_042550	RB151_041030	50S ribosomal protein L17.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.703
rplQ	truC	RB151_042550	RB151_035550	50S ribosomal protein L17.	tRNA pseudouridine synthase C.	0.489
rplQ	truD	RB151_042550	RB151_034890	50S ribosomal protein L17.	tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.713

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