STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdnH_2Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit. (328 aa)    
Predicted Functional Partners:
hybB
Putative Ni/Fe-hydrogenase 2 b-type cytochrome subunit.
 
 0.994
hybO
Hydrogenase-2 small chain precursor.
 
  
 0.977
hybC
Hydrogenase-2 large chain precursor; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.951
hybE
Hydrogenase-2 operon protein HybE.
 
    0.935
hybD
Hydrogenase 2 maturation protease.
 
  
 0.901
hypA
Hydrogenase nickel incorporation protein HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
  
 0.784
frdA
Fumarate reductase flavoprotein subunit.
  
 
 0.747
hypC
Hydrogenase isoenzymes formation protein HypC.
  
  
 0.596
hypE
Hydrogenase isoenzymes formation protein HypE.
     
 0.582
fdnI
Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit.
 
 
 0.573
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.