Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fdnH_2Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit. (328 aa)    
Predicted Functional Partners:
hybB
Putative Ni/Fe-hydrogenase 2 b-type cytochrome subunit.
 
 0.997
hybO
Hydrogenase-2 small chain precursor.
 
  
 0.992
hybC
Hydrogenase-2 large chain precursor; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.968
hybE
Hydrogenase-2 operon protein HybE.
 
    0.950
hybD
Hydrogenase 2 maturation protease.
 
  
 0.926
hypA
Hydrogenase nickel incorporation protein HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
  
 0.789
frdA
Fumarate reductase flavoprotein subunit.
  
 
 0.734
fdoI
Formate dehydrogenase, cytochrome b556(fdo) subunit.
  
 
 0.630
hypE
Hydrogenase isoenzymes formation protein HypE.
     
 0.623
hypC
Hydrogenase isoenzymes formation protein HypC.
  
  
 0.622
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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