STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH2,4-dienoyl-CoA reductase [NADPH]. (673 aa)    
Predicted Functional Partners:
etfB_2
Electron transfer flavoprotein subunit beta.
 
 
 0.952
etfB_1
Electron transfer flavoprotein subunit beta.
  
 
 0.946
narH
Respiratory nitrate reductase 1 beta chain.
    
 
 0.906
etfA_2
Electron transfer flavoprotein subunit alpha.
 
 
 
 0.886
etfA_1
Electron transfer flavoprotein subunit alpha; Required for anaerobic carnitine reduction. May bring reductant to CaiA.
   
 
 0.872
fre_1
NAD(P)H-flavin reductase.
  
 
 0.814
fre_2
NAD(P)H-flavin reductase.
  
 
 0.814
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.793
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
  
  
 0.730
pobB
Phenoxybenzoate dioxygenase subunit beta; Converts carnitine to trimethylamine and malic semialdehyde.
 
 
 0.723
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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