STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbATranscriptional regulator BolA; Belongs to the BolA/IbaG family. (84 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.747
grxD
Glutaredoxin-4; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 
 0.622
mlaB
Putative phospholipid ABC transporter-binding protein MlaB.
       0.502
mlaC
Putative phospholipid-binding protein MlaC precursor.
       0.502
mlaD
Putative phospholipid ABC transporter-binding protein MlaD.
     
 0.497
mlaF
Putative phospholipid import ATP-binding protein MlaF.
     
 0.479
gshA
Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
     0.462
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
       0.455
sixA
Phosphohistidine phosphatase SixA.
  
     0.453
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
    0.410
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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