Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
mlaBPutative phospholipid ABC transporter-binding protein MlaB. (96 aa)    
Predicted Functional Partners:
mlaC
Putative phospholipid-binding protein MlaC precursor.
 
 
 0.995
mlaF
Putative phospholipid import ATP-binding protein MlaF.
  
 0.995
mlaD
Putative phospholipid ABC transporter-binding protein MlaD.
  
 0.989
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
  
 0.989
lptC
Lipopolysaccharide export system protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
 
     0.794
ydgH
Hypothetical protein.
  
     0.774
APC13510.1
Hypothetical protein.
  
     0.773
APC12068.1
Hypothetical protein.
  
     0.772
APC13961.1
Hypothetical protein.
  
     0.771
APC11718.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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