Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mlaDPutative phospholipid ABC transporter-binding protein MlaD. (165 aa)    
Predicted Functional Partners:
mlaC
Putative phospholipid-binding protein MlaC precursor.
 
 0.999
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
 
 0.999
mlaF
Putative phospholipid import ATP-binding protein MlaF.
 
 0.999
mlaB
Putative phospholipid ABC transporter-binding protein MlaB.
  
 0.989
mlaA
Putative phospholipid-binding lipoprotein MlaA precursor.
 
   
 0.894
motB
Motility protein B.
   
   0.621
yrbA
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
     
 0.616
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.512
pqiB_1
Paraquat-inducible protein B.
  
   
 0.472
yhbJ
glmZ(sRNA)-inactivating NTPase; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily.
 
     0.429
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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