Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mlaEPutative phospholipid ABC transporter permease protein MlaE. (260 aa)    
Predicted Functional Partners:
mlaD
Putative phospholipid ABC transporter-binding protein MlaD.
 
 0.999
mlaF
Putative phospholipid import ATP-binding protein MlaF.
 
 0.999
mlaB
Putative phospholipid ABC transporter-binding protein MlaB.
  
 0.989
mlaC
Putative phospholipid-binding protein MlaC precursor.
 
 
 0.984
mlaA
Putative phospholipid-binding lipoprotein MlaA precursor.
 
   
 0.663
lptB_1
Lipopolysaccharide export system ATP-binding protein LptB.
 
  
  0.647
yrbA
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
       0.554
lptF
Lipopolysaccharide export system permease protein LptF.
  
  
 0.548
lptG
Lipopolysaccharide export system permease protein LptG.
  
 
 0.538
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.518
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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