STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC13484.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
bhsA
Multiple stress resistance protein BhsA precursor.
  
     0.598
APC10724.1
Lipoprotein.
  
     0.540
APC11899.1
Putative transporter.
  
     0.514
APC12585.1
Hypothetical protein.
  
     0.475
APC11900.1
Putative transporter.
  
     0.443
zntA
Lead, cadmium, zinc and mercury-transporting ATPase.
       0.438
APC12583.1
Hypothetical protein.
  
     0.425
bfd
Bacterioferritin-associated ferredoxin.
  
     0.419
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.