Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APC13558.13 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase. (342 aa)    
Predicted Functional Partners:
APC13559.1
4-pyridoxolactonase.
     0.917
APC13560.1
Hypothetical protein.
 
     0.898
APC13561.1
PAP2 superfamily protein.
 
 
 0.898
APC13562.1
Fatty acid hydroxylase superfamily protein.
 
 
 0.845
skp
Chaperone protein Skp precursor; Belongs to the skp family.
    
   0.829
fabH_2
3-oxoacyl-[acyl-carrier-protein] synthase 3.
 
     0.808
APC13563.1
Fatty acid desaturase.
       0.804
galE_3
UDP-glucose 4-epimerase.
  
     0.698
benM_2
HTH-type transcriptional regulator BenM.
       0.598
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.498
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.