Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APC13562.1Fatty acid hydroxylase superfamily protein. (392 aa)    
Predicted Functional Partners:
APC13561.1
PAP2 superfamily protein.
 
 
 0.957
APC13563.1
Fatty acid desaturase.
 
  
 0.936
APC13560.1
Hypothetical protein.
 
     0.852
APC13558.1
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase.
 
 
 0.845
APC13559.1
4-pyridoxolactonase.
 
     0.842
desA3
Stearoyl-CoA 9-desaturase.
 
  
 0.787
fabH_2
3-oxoacyl-[acyl-carrier-protein] synthase 3.
     
 0.786
benM_2
HTH-type transcriptional regulator BenM.
       0.598
ramA_2
(R)-stereoselective amidase.
       0.433
namA_1
NADPH dehydrogenase.
   
 
 0.425
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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