STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
andAaAnthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. (404 aa)    
Predicted Functional Partners:
andAb
Anthranilate 1,2-dioxygenase ferredoxin subunit.
 
 
 0.930
APC13645.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
     0.924
napA
Periplasmic nitrate reductase precursor; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
      0.892
norV
Anaerobic nitric oxide reductase flavorubredoxin.
    
 0.853
sauU
Putative sulfoacetate transporter SauU.
 
     0.841
carAa
Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa.
 
  
 0.837
mtnD
Acireductone dioxygenase.
 
     0.820
catD_3
3-oxoadipate enol-lactonase 2.
 
 
 
 0.793
fdx
2Fe-2S ferredoxin.
  
 
 0.786
baiA2
Bile acid 7-dehydroxylase 2.
 
 
 0.772
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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