STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtnDAcireductone dioxygenase. (170 aa)    
Predicted Functional Partners:
sauU
Putative sulfoacetate transporter SauU.
     0.960
nadX
L-aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.949
APC13645.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
    0.947
baiA2
Bile acid 7-dehydroxylase 2.
 
    0.930
catD_3
3-oxoadipate enol-lactonase 2.
 
    0.897
carAa
Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa.
 
  
 0.893
ilvG_1
Acetolactate synthase isozyme 2 large subunit; Belongs to the TPP enzyme family.
 
    0.880
andAa
Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component.
 
     0.832
pldh-t
Pyridoxal 4-dehydrogenase.
 
    0.801
betB_3
NAD/NADP-dependent betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    0.756
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.