STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtnDAcireductone dioxygenase. (170 aa)    
Predicted Functional Partners:
sauU
Putative sulfoacetate transporter SauU.
     0.960
nadX
L-aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.937
APC13645.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
    0.933
baiA2
Bile acid 7-dehydroxylase 2.
 
    0.929
catD_3
3-oxoadipate enol-lactonase 2.
 
    0.897
carAa
Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa.
 
    0.882
ilvG_1
Acetolactate synthase isozyme 2 large subunit; Belongs to the TPP enzyme family.
 
    0.881
andAa
Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component.
 
     0.820
pldh-t
Pyridoxal 4-dehydrogenase.
 
    0.800
betB_3
NAD/NADP-dependent betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    0.755
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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