Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APC13712.1Heavy-metal-associated domain protein. (65 aa)    
Predicted Functional Partners:
actP_2
Copper-transporting P-type ATPase.
 
 
 0.831
sodC1
Superoxide dismutase [Cu-Zn] 1 precursor; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.829
zntA
Lead, cadmium, zinc and mercury-transporting ATPase.
  
 
 0.754
hmrR
HTH-type transcriptional regulator HmrR.
 
  
 0.752
cirA_3
Colicin I receptor precursor.
  
   
 0.726
cirA_1
Colicin I receptor precursor.
  
   
 0.717
APC13710.1
Glutaredoxin.
 
   
 0.681
copA
Copper-exporting P-type ATPase A.
  
 
 0.669
merR1
Mercuric resistance operon regulatory protein.
 
  
 0.487
dps
DNA protection during starvation protein; Belongs to the Dps family.
 
  
 0.437
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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