STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnTPutative 2-aminoethylphosphonate import ATP-binding protein PhnT; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
phnV_2
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
 
 
 0.996
phnU
Putative 2-aminoethylphosphonate transport system permease protein PhnU.
 
  
  0.993
phnS
Putative 2-aminoethylphosphonate-binding periplasmic protein precursor.
 
 
 0.991
potB
Spermidine/putrescine transport system permease protein PotB.
 
 
 0.896
potD
Spermidine/putrescine-binding periplasmic protein precursor; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.845
ydcV
Inner membrane ABC transporter permease protein YdcV.
  
 0.814
ddpD
Putative D,D-dipeptide transport ATP-binding protein DdpD; Belongs to the ABC transporter superfamily.
 
   
0.670
phnR
Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons.
 
 
   0.637
mdlB
Multidrug resistance-like ATP-binding protein MdlB.
 
    
0.572
modB
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.568
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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