Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pglHGalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase. (370 aa)    
Predicted Functional Partners:
APC14022.1
Polysaccharide biosynthesis protein.
  
  
 0.816
rfaG
Lipopolysaccharide core biosynthesis protein RfaG.
 
  
 0.811
epsH
Putative glycosyltransferase EpsH.
 
  
 0.795
APC14023.1
LicD family protein.
       0.746
APC14025.1
Hypothetical protein.
       0.746
rfaP
Lipopolysaccharide core heptose(I) kinase RfaP.
  
  
 0.729
wbbD_2
UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase.
 
   
 0.715
rfbX
Putative O-antigen transporter.
  
  
 0.709
APC14029.1
Polysaccharide biosynthesis/export protein.
 
  
 0.670
rfaQ
Lipopolysaccharide core heptosyltransferase RfaQ.
  
  
 0.652
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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