STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbbD_2UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase. (274 aa)    
Predicted Functional Partners:
epsH
Putative glycosyltransferase EpsH.
 
 
 0.833
APC12121.1
Hypothetical protein.
  
 
 0.803
APC12453.1
Enhanced serine sensitivity protein SseB.
  
 
 0.803
galE_3
UDP-glucose 4-epimerase.
  
 
 0.790
pglH
GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase.
 
   
 0.716
arnD
Putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.
  
  
 0.704
icaB
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase precursor.
  
  
 0.704
APC14029.1
Polysaccharide biosynthesis/export protein.
     
 0.680
wzb_2
Low molecular weight protein-tyrosine-phosphatase wzb.
     
 0.662
APC14023.1
LicD family protein.
 
   
 0.657
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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