STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wzb_2Low molecular weight protein-tyrosine-phosphatase wzb. (142 aa)    
Predicted Functional Partners:
APC14029.1
Polysaccharide biosynthesis/export protein.
  
 0.933
wzc_2
Tyrosine-protein kinase wzc.
 
 
 0.920
wzb_1
Low molecular weight protein-tyrosine-phosphatase wzb.
  
  
 
0.900
wzc_1
Tyrosine-protein kinase wzc.
 
 
 0.773
APC10634.1
Polysaccharide biosynthesis/export protein.
  
 0.707
wbbD_2
UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase.
     
 0.662
galE_3
UDP-glucose 4-epimerase.
       0.623
epsH
Putative glycosyltransferase EpsH.
  
  
 0.622
galE_4
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.620
pglH
GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase.
     
 0.494
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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