STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES49233.1Thiol-disulfide isomerase or thioredoxin. (194 aa)    
Predicted Functional Partners:
SES49230.1
Cytochrome c-type biogenesis protein.
 
  
 0.895
SES49227.1
Cytochrome c biogenesis protein.
 
  
 0.833
SES49224.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.802
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.778
SES49221.1
Protein of unknown function.
 
     0.775
SES49235.1
Broad specificity phosphatase PhoE.
  
    0.774
SES38482.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.750
SES49241.1
DNA-binding transcriptional regulator, MarR family.
       0.608
SER91166.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
 
   0.583
SES49244.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
 
     0.506
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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