STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER79414.12,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (268 aa)    
Predicted Functional Partners:
SES16759.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.903
SES40077.1
Glutamate synthase (NADH) large subunit.
     
 0.827
SES42696.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.823
SES16690.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.800
SES47042.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
 
 0.793
SER79383.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
       0.773
SES27667.1
Ferredoxin-NADP reductase.
  
 0.758
SES13237.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.717
SES38482.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.661
SER79445.1
Transcriptional regulator, LuxR family.
       0.658
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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