STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER96402.1Copper chaperone CopZ. (77 aa)    
Predicted Functional Partners:
SER96312.1
Cu+-exporting ATPase.
 
 
 0.878
SER98528.1
Cu+-exporting ATPase.
 
 
 0.850
SES48953.1
Cu+-exporting ATPase.
 
 
 0.848
SES45423.1
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
  
 
 0.768
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.522
SER96380.1
Hypothetical protein.
       0.520
SER96335.1
Putative ABC transport system permease protein.
       0.470
SER96355.1
Putative ABC transport system ATP-binding protein.
       0.470
SER96423.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.459
SES48468.1
Transcriptional repressor, CopY family.
  
  
 0.446
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.