STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER97522.1Glutathione-independent formaldehyde dehydrogenase. (380 aa)    
Predicted Functional Partners:
SES42696.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.891
SES21977.1
S-(hydroxymethyl)mycothiol dehydrogenase.
  
 
 
0.809
SES47501.1
L-threonine ammonia-lyase.
   
 
  0.719
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.717
SES49661.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.716
SES07807.1
Phosphoglucomutase.
   
 0.659
SES26969.1
Xylulokinase; Belongs to the FGGY kinase family.
  
 
 0.650
SES13237.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.638
SES27667.1
Ferredoxin-NADP reductase.
  
 
 0.638
SES39398.1
Glucose-6-phosphate isomerase.
   
 0.623
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.