STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES10566.12'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (193 aa)    
Predicted Functional Partners:
SES10596.1
Hypothetical protein.
       0.560
SER64176.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
  
     0.516
SES10644.1
50S ribosome-binding GTPase.
 
     0.442
SES10620.1
Hypothetical protein.
 
     0.441
SES10509.1
Hypothetical protein.
       0.427
SES10540.1
Hypothetical protein.
       0.427
SES10466.1
Hypothetical protein.
       0.410
SES10487.1
Mn2+ and Fe2+ transporters of the NRAMP family.
       0.410
SES10442.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.408
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.