STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES24815.1Regulatory protein, luxR family. (360 aa)    
Predicted Functional Partners:
SES42696.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.776
SES09548.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
  
 
  0.673
SES39080.1
uroporphyrinogen-III C-methyltransferase.
  
 
  0.673
SES49661.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.671
SES24835.1
DNA helicase IV.
 
     0.623
SES14776.1
Helix-turn-helix domain-containing protein.
  
     0.600
SES08009.1
Hypothetical protein.
  
     0.563
SES49221.1
Protein of unknown function.
  
     0.546
SES43613.1
Hypothetical protein.
  
     0.510
SER99998.1
Fibronectin type III domain-containing protein.
  
     0.482
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.