STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES33868.1LytR cell envelope-related transcriptional attenuator. (291 aa)    
Predicted Functional Partners:
SES48008.1
LGFP repeat-containing protein.
  
     0.666
SES33835.1
L,D-peptidoglycan transpeptidase YkuD, ErfK/YbiS/YcfS/YnhG family.
 
     0.630
SES22335.1
Hypothetical protein.
  
     0.613
SES07544.1
FtsX-like permease family protein.
  
     0.605
SES40268.1
Protein of unknown function.
  
     0.595
SES33856.1
D-alanyl-D-alanine carboxypeptidase.
       0.576
SER78060.1
DivIVA domain-containing protein.
  
     0.542
SES33935.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.540
SES08009.1
Hypothetical protein.
  
     0.533
SES28311.1
Hypothetical protein.
  
     0.528
Your Current Organism:
Phycicoccus cremeus
NCBI taxonomy Id: 587636
Other names: CGMCC 1.6963, JCM 17739, NBRC 104261, P. cremeus, Phycicoccus cremeus Zhang et al. 2011, Phycicoccus sp. V2M29, strain V2M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.