Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER79163.1 | SES20865.1 | SAMN05216199_1231 | SAMN05216199_2333 | Trypsin. | Regulatory protein, luxR family. | 0.421 |
SER79163.1 | SES47621.1 | SAMN05216199_1231 | SAMN05216199_4118 | Trypsin. | Hypothetical protein. | 0.483 |
SES20865.1 | SER79163.1 | SAMN05216199_2333 | SAMN05216199_1231 | Regulatory protein, luxR family. | Trypsin. | 0.421 |
SES20865.1 | SES26389.1 | SAMN05216199_2333 | SAMN05216199_2636 | Regulatory protein, luxR family. | Acyl-[acyl-carrier-protein] desaturase. | 0.444 |
SES20865.1 | SES47621.1 | SAMN05216199_2333 | SAMN05216199_4118 | Regulatory protein, luxR family. | Hypothetical protein. | 0.690 |
SES26389.1 | SES20865.1 | SAMN05216199_2636 | SAMN05216199_2333 | Acyl-[acyl-carrier-protein] desaturase. | Regulatory protein, luxR family. | 0.444 |
SES26389.1 | SES47621.1 | SAMN05216199_2636 | SAMN05216199_4118 | Acyl-[acyl-carrier-protein] desaturase. | Hypothetical protein. | 0.471 |
SES38678.1 | SES47621.1 | SAMN05216199_3197 | SAMN05216199_4118 | Immune inhibitor A. | Hypothetical protein. | 0.446 |
SES47621.1 | SER79163.1 | SAMN05216199_4118 | SAMN05216199_1231 | Hypothetical protein. | Trypsin. | 0.483 |
SES47621.1 | SES20865.1 | SAMN05216199_4118 | SAMN05216199_2333 | Hypothetical protein. | Regulatory protein, luxR family. | 0.690 |
SES47621.1 | SES26389.1 | SAMN05216199_4118 | SAMN05216199_2636 | Hypothetical protein. | Acyl-[acyl-carrier-protein] desaturase. | 0.471 |
SES47621.1 | SES38678.1 | SAMN05216199_4118 | SAMN05216199_3197 | Hypothetical protein. | Immune inhibitor A. | 0.446 |