STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO84053.12-hydroxy-3-oxopropionate reductase. (299 aa)    
Predicted Functional Partners:
SFO84030.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 0.989
SFO84079.1
Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family.
 
 
 0.983
SFP72752.1
4-carboxymuconolactone decarboxylase.
 
 
  0.876
SFO97567.1
Fructose-bisphosphate aldolase, class II.
 
    0.817
SFO96030.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.805
SFO91753.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.774
SFQ21716.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
  
 
  0.753
SFQ49381.1
propionyl-CoA carboxylase alpha chain.
  
 
  0.753
SFP37498.1
acyl-CoA oxidase.
   
 
  0.751
SFO84105.1
Allantoinase.
  
    0.749
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.