STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO80928.1Alpha-tubulin suppressor. (330 aa)    
Predicted Functional Partners:
SFQ64357.1
NADH-quinone oxidoreductase subunit M.
    
 
 0.913
SFQ72088.1
NADH-quinone oxidoreductase subunit M.
    
 
 0.913
SFP32938.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
 0.824
SFP87379.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
    
  0.814
SFP87405.1
FHA domain-containing protein.
    
  0.814
SFQ58356.1
FHA domain-containing protein.
    
  0.814
SFQ36349.1
Hypothetical protein.
  
 
  0.799
SFO89139.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
 0.798
SFQ36445.1
Carbonic anhydrase.
   
   0.775
SFQ73084.1
Sulfate permease, SulP family.
    
   0.775
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.