STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO94077.1Glycosyltransferase involved in cell wall bisynthesis. (423 aa)    
Predicted Functional Partners:
SFQ25295.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.716
SFO95144.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
   
 
  0.714
SFP33861.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
   
 
  0.714
SFQ55590.1
Diacylglycerol kinase (ATP).
   
 
  0.714
SFP11096.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
    
 
 0.708
SFP39541.1
Prolyl oligopeptidase family protein.
    
 
 0.704
SFQ30294.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.606
SFP52523.1
Trehalose-phosphatase.
  
 0.602
SFQ44708.1
Acyl carrier protein.
 
 
   0.581
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
     
 0.555
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.