STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP43356.1Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family. (283 aa)    
Predicted Functional Partners:
SFP43393.1
Phosphopantetheine attachment site.
 
  
 0.685
SFO88816.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
 
 
 0.594
SFQ69084.1
Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.589
ectC
L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
    
 0.587
SFQ00002.1
Acyl transferase domain-containing protein.
 
 
 0.561
SFP43322.1
Acetyltransferase (GNAT) domain-containing protein.
       0.548
SFP43239.1
Phosphonopyruvate decarboxylase/sulfopyruvate decarboxylase subunit beta.
     
 0.536
SFQ44543.1
Hypothetical protein.
     
 0.535
SFP43289.1
Sulfopyruvate decarboxylase subunit alpha/phosphonopyruvate decarboxylase.
       0.531
SFQ54741.1
Predicted alpha-1,6-mannanase, GH76 family.
  
     0.473
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.