Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO96457.1 | SFP45964.1 | SAMN05421810_101539 | SAMN05421810_102649 | Polyhydroxyalkanoate synthase. | DNA-binding transcriptional regulator, AcrR family. | 0.401 |
SFP45964.1 | SFO96457.1 | SAMN05421810_102649 | SAMN05421810_101539 | DNA-binding transcriptional regulator, AcrR family. | Polyhydroxyalkanoate synthase. | 0.401 |
SFP45964.1 | SFP46005.1 | SAMN05421810_102649 | SAMN05421810_102650 | DNA-binding transcriptional regulator, AcrR family. | Short-chain dehydrogenase. | 0.851 |
SFP45964.1 | SFP46037.1 | SAMN05421810_102649 | SAMN05421810_102651 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.484 |
SFP45964.1 | SFP82048.1 | SAMN05421810_102649 | SAMN05421810_103517 | DNA-binding transcriptional regulator, AcrR family. | Iron complex transport system substrate-binding protein. | 0.411 |
SFP46005.1 | SFP45964.1 | SAMN05421810_102650 | SAMN05421810_102649 | Short-chain dehydrogenase. | DNA-binding transcriptional regulator, AcrR family. | 0.851 |
SFP46005.1 | SFP46037.1 | SAMN05421810_102650 | SAMN05421810_102651 | Short-chain dehydrogenase. | Hypothetical protein. | 0.484 |
SFP46037.1 | SFP45964.1 | SAMN05421810_102651 | SAMN05421810_102649 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family. | 0.484 |
SFP46037.1 | SFP46005.1 | SAMN05421810_102651 | SAMN05421810_102650 | Hypothetical protein. | Short-chain dehydrogenase. | 0.484 |
SFP82048.1 | SFP45964.1 | SAMN05421810_103517 | SAMN05421810_102649 | Iron complex transport system substrate-binding protein. | DNA-binding transcriptional regulator, AcrR family. | 0.411 |