Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO85140.1 | SFP04730.1 | SAMN05421810_101179 | SAMN05421810_101800 | Protein of unknown function. | Glycine/D-amino acid oxidase. | 0.940 |
SFO85140.1 | SFP28578.1 | SAMN05421810_101179 | SAMN05421810_102133 | Protein of unknown function. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.980 |
SFO85140.1 | SFP52709.1 | SAMN05421810_101179 | SAMN05421810_102853 | Protein of unknown function. | Hypothetical protein. | 0.966 |
SFO85140.1 | SFP96353.1 | SAMN05421810_101179 | SAMN05421810_10429 | Protein of unknown function. | Protein of unknown function. | 0.963 |
SFO85140.1 | SFQ30962.1 | SAMN05421810_101179 | SAMN05421810_10643 | Protein of unknown function. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.980 |
SFO85140.1 | SFQ36764.1 | SAMN05421810_101179 | SAMN05421810_106318 | Protein of unknown function. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.996 |
SFO85140.1 | SFQ36785.1 | SAMN05421810_101179 | SAMN05421810_106319 | Protein of unknown function. | Ubiquinol-cytochrome c reductase iron-sulfur subunit. | 0.997 |
SFO85140.1 | SFQ36836.1 | SAMN05421810_101179 | SAMN05421810_106321 | Protein of unknown function. | Cytochrome c oxidase subunit 3. | 0.994 |
SFO85140.1 | SFQ36949.1 | SAMN05421810_101179 | SAMN05421810_106326 | Protein of unknown function. | Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.995 |
SFO85140.1 | SFQ36982.1 | SAMN05421810_101179 | SAMN05421810_106327 | Protein of unknown function. | Cytochrome c oxidase subunit 2. | 0.996 |
SFP04730.1 | SFO85140.1 | SAMN05421810_101800 | SAMN05421810_101179 | Glycine/D-amino acid oxidase. | Protein of unknown function. | 0.940 |
SFP04730.1 | SFP28578.1 | SAMN05421810_101800 | SAMN05421810_102133 | Glycine/D-amino acid oxidase. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.964 |
SFP04730.1 | SFP52709.1 | SAMN05421810_101800 | SAMN05421810_102853 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.906 |
SFP04730.1 | SFP96353.1 | SAMN05421810_101800 | SAMN05421810_10429 | Glycine/D-amino acid oxidase. | Protein of unknown function. | 0.934 |
SFP04730.1 | SFQ30962.1 | SAMN05421810_101800 | SAMN05421810_10643 | Glycine/D-amino acid oxidase. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.964 |
SFP04730.1 | SFQ36764.1 | SAMN05421810_101800 | SAMN05421810_106318 | Glycine/D-amino acid oxidase. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.998 |
SFP04730.1 | SFQ36836.1 | SAMN05421810_101800 | SAMN05421810_106321 | Glycine/D-amino acid oxidase. | Cytochrome c oxidase subunit 3. | 0.992 |
SFP04730.1 | SFQ36949.1 | SAMN05421810_101800 | SAMN05421810_106326 | Glycine/D-amino acid oxidase. | Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.957 |
SFP04730.1 | SFQ36982.1 | SAMN05421810_101800 | SAMN05421810_106327 | Glycine/D-amino acid oxidase. | Cytochrome c oxidase subunit 2. | 0.971 |
SFP28578.1 | SFO85140.1 | SAMN05421810_102133 | SAMN05421810_101179 | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Protein of unknown function. | 0.980 |
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