STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP52994.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
atpG
F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
 
  0.741
SFP34085.1
Lipoprotein LpqB beta-propeller domain-containing protein.
  
     0.617
SFO85140.1
Protein of unknown function.
  
     0.563
SFQ05309.1
Protein of unknown function.
  
     0.560
SFP36290.1
Hypothetical protein.
  
     0.519
SFP53027.1
Hypothetical protein.
       0.519
SFQ20881.1
TIGR03089 family protein.
  
     0.475
SFQ41110.1
Hypothetical protein.
  
     0.469
SFP67797.1
Protein of unknown function.
  
     0.454
SFP69941.1
Uncharacterized membrane protein YccC.
  
     0.435
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.