STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP69779.1Putative tRNA adenosine deaminase-associated protein. (160 aa)    
Predicted Functional Partners:
tadA
tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.803
SFP25870.1
Hypothetical protein.
  
     0.768
SFP24563.1
Protein of unknown function.
  
     0.730
SFP53852.1
Hypothetical protein.
  
     0.721
SFQ22661.1
Hypothetical protein.
  
     0.716
SFQ18262.1
Hypothetical protein.
  
     0.685
SFP41671.1
Hypothetical protein.
  
     0.677
SFP97622.1
Protein of unknown function.
  
     0.676
SFP88410.1
RecB family nuclease, putative, TM0106 family.
  
     0.675
SFQ34577.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.668
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.