STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP66377.1Dipeptidyl aminopeptidase/acylaminoacyl peptidase. (620 aa)    
Predicted Functional Partners:
SFQ51297.1
PTS system, N-acetylglucosamine-specific IIA component.
    
   0.700
SFP74858.1
Hypothetical protein.
  
     0.661
SFQ51130.1
Helix-turn-helix.
  
     0.659
SFQ52264.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.603
SFP66344.1
Methyltransferase domain-containing protein.
       0.564
SFQ07321.1
Predicted phosphoesterase.
  
     0.558
SFQ49700.1
Hypothetical protein.
  
     0.490
SFQ59043.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.473
SFP85357.1
Hypothetical protein.
  
     0.454
SFP52994.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.