STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP77269.1PPE-repeat protein. (556 aa)    
Predicted Functional Partners:
SFO89139.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
 0.811
SFP32938.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
 0.811
SFP85247.1
Protein of unknown function.
  
 
  0.809
SFQ23776.1
Protein of unknown function.
  
 
  0.807
SFP77242.1
EspG family protein.
  
    0.780
SFP84610.1
PPE family protein.
  
     0.770
SFO86316.1
Hypothetical protein.
  
     0.762
SFP82903.1
Hypothetical protein.
  
    0.759
SFQ21072.1
Alpha-1,2-mannosyltransferase.
  
 
   0.754
SFP39665.1
SurA N-terminal domain-containing protein.
  
     0.738
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.