STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP83164.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SFP01306.1
Roadblock/LC7 domain-containing protein.
  
     0.596
SFP83136.1
Hypothetical protein.
 
    
0.541
egtD
L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.532
SFP26819.1
Hypothetical protein.
  
     0.527
SFP83209.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.513
SFP48252.1
Signal transduction histidine kinase.
  
     0.499
SFP73897.1
Superoxide dismutase, Cu-Zn family.
  
    0.450
SFO91363.1
Protein of unknown function.
  
     0.445
SFP82903.1
Hypothetical protein.
  
     0.443
SFP01339.1
Signal transduction histidine kinase.
  
     0.442
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.