STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP88153.1Beta-glucosidase. (439 aa)    
Predicted Functional Partners:
SFQ58703.1
6-phospho-beta-glucosidase.
 
 
 0.841
SFO92640.1
Protein of unknown function.
    
 0.812
SFP95720.1
Endo-1,4-beta-xylanase.
    
 0.808
SFP88178.1
Major Facilitator Superfamily protein.
 
    0.804
SFQ51297.1
PTS system, N-acetylglucosamine-specific IIA component.
  
 
 0.792
SFP45727.1
Aldose 1-epimerase.
  
 
 0.783
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.779
SFQ50333.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.770
SFQ66400.1
Repeat domain-containing protein.
   
 
 0.767
SFQ60942.1
Polyphosphate glucokinase.
  
 
 0.763
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.