STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP96099.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SFP96079.1
acyl-CoA thioester hydrolase.
 
    0.868
SFP96057.1
Glutamate dehydrogenase.
       0.822
SFQ24959.1
Anti-sigma-D factor RsdA to sigma factor binding region.
  
     0.774
SFP41671.1
Hypothetical protein.
  
     0.772
SFQ25843.1
Chlorophyllase enzyme.
  
     0.772
SFQ45821.1
Protein of unknown function.
  
     0.772
SFP97622.1
Protein of unknown function.
  
     0.771
SFQ22661.1
Hypothetical protein.
  
     0.771
SFQ18262.1
Hypothetical protein.
  
     0.771
SFQ64646.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.