STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ02792.1Chromosome segregation protein Spo0J, contains ParB-like nuclease domain. (335 aa)    
Predicted Functional Partners:
SFQ16388.1
AAA-like domain-containing protein.
    
 
 0.717
SFQ02822.1
Phenazine biosynthesis protein phzE.
     
 0.643
SFQ02850.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Belongs to the class-II DAHP synthase family.
       0.639
SFP85855.1
Chromosome partitioning protein.
  
 
 0.623
SFQ06758.1
Cellulose biosynthesis protein BcsQ.
  
 
 0.623
SFQ55956.1
Chromosome partitioning protein.
  
 
 0.623
SFQ73309.1
Chromosome partitioning protein.
  
 
 0.623
SFQ73744.1
Helicase/secretion neighborhood CpaE-like protein.
  
 
 0.591
rsmG
16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.573
SFQ02882.1
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
       0.460
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.