STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ20411.1Glycosyltransferase involved in cell wall bisynthesis. (364 aa)    
Predicted Functional Partners:
SFQ20388.1
Glycosyltransferase, GT2 family.
 
    0.924
SFQ20358.1
Hypothetical protein.
    0.883
SFP11096.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
    
 
 0.708
SFP39541.1
Prolyl oligopeptidase family protein.
    
 
 0.704
SFQ20285.1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
    0.639
SFQ20332.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.610
SFP52523.1
Trehalose-phosphatase.
  
 0.602
SFQ30294.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.597
SFP31098.1
Starch phosphorylase.
  
 0.579
SFQ20309.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.568
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.