STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ17952.1Protein of unknown function. (374 aa)    
Predicted Functional Partners:
SFQ73882.1
Putative Holin-X, holin superfamily III.
  
     0.730
SFP37668.1
Hypothetical protein.
  
     0.718
SFP85357.1
Hypothetical protein.
  
     0.703
SFQ17898.1
TIGR02569 family protein.
 
     0.685
SFQ51994.1
Uncharacterized conserved protein.
  
     0.663
SFQ41524.1
Polyketide cyclase / dehydrase and lipid transport.
  
  
 0.660
SFQ41576.1
Heparin binding hemagglutinin HbhA.
  
     0.649
SFP26992.1
Protein of unknown function.
  
     0.642
SFQ22661.1
Hypothetical protein.
  
    0.642
SFP24563.1
Protein of unknown function.
  
     0.624
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.