Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP50144.1 | SFP96589.1 | SAMN05421810_102772 | SAMN05421810_10438 | Uncharacterized HhH-GPD family protein. | Endonuclease-8; Belongs to the FPG family. | 0.402 |
SFP50144.1 | SFQ06730.1 | SAMN05421810_102772 | SAMN05421810_104366 | Uncharacterized HhH-GPD family protein. | Endonuclease-8. | 0.402 |
SFP50144.1 | SFQ36721.1 | SAMN05421810_102772 | SAMN05421810_106316 | Uncharacterized HhH-GPD family protein. | DNA polymerase-3 subunit epsilon. | 0.436 |
SFP50144.1 | SFQ45991.1 | SAMN05421810_102772 | SAMN05421810_107305 | Uncharacterized HhH-GPD family protein. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.566 |
SFP50144.1 | SFQ55517.1 | SAMN05421810_102772 | SAMN05421810_109179 | Uncharacterized HhH-GPD family protein. | 5'-3' exonuclease. | 0.597 |
SFP50144.1 | coaE | SAMN05421810_102772 | SAMN05421810_11272 | Uncharacterized HhH-GPD family protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.570 |
SFP50144.1 | mutM | SAMN05421810_102772 | SAMN05421810_10132 | Uncharacterized HhH-GPD family protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.402 |
SFP50144.1 | polA | SAMN05421810_102772 | SAMN05421810_11261 | Uncharacterized HhH-GPD family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.673 |
SFP96589.1 | SFP50144.1 | SAMN05421810_10438 | SAMN05421810_102772 | Endonuclease-8; Belongs to the FPG family. | Uncharacterized HhH-GPD family protein. | 0.402 |
SFP96589.1 | SFQ06730.1 | SAMN05421810_10438 | SAMN05421810_104366 | Endonuclease-8; Belongs to the FPG family. | Endonuclease-8. | 0.881 |
SFP96589.1 | SFQ36721.1 | SAMN05421810_10438 | SAMN05421810_106316 | Endonuclease-8; Belongs to the FPG family. | DNA polymerase-3 subunit epsilon. | 0.589 |
SFP96589.1 | SFQ45991.1 | SAMN05421810_10438 | SAMN05421810_107305 | Endonuclease-8; Belongs to the FPG family. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.845 |
SFP96589.1 | SFQ55517.1 | SAMN05421810_10438 | SAMN05421810_109179 | Endonuclease-8; Belongs to the FPG family. | 5'-3' exonuclease. | 0.471 |
SFP96589.1 | coaE | SAMN05421810_10438 | SAMN05421810_11272 | Endonuclease-8; Belongs to the FPG family. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.601 |
SFP96589.1 | mutM | SAMN05421810_10438 | SAMN05421810_10132 | Endonuclease-8; Belongs to the FPG family. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.871 |
SFP96589.1 | polA | SAMN05421810_10438 | SAMN05421810_11261 | Endonuclease-8; Belongs to the FPG family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.895 |
SFQ06730.1 | SFP50144.1 | SAMN05421810_104366 | SAMN05421810_102772 | Endonuclease-8. | Uncharacterized HhH-GPD family protein. | 0.402 |
SFQ06730.1 | SFP96589.1 | SAMN05421810_104366 | SAMN05421810_10438 | Endonuclease-8. | Endonuclease-8; Belongs to the FPG family. | 0.881 |
SFQ06730.1 | SFQ36721.1 | SAMN05421810_104366 | SAMN05421810_106316 | Endonuclease-8. | DNA polymerase-3 subunit epsilon. | 0.856 |
SFQ06730.1 | SFQ45991.1 | SAMN05421810_104366 | SAMN05421810_107305 | Endonuclease-8. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.611 |
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