STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ42390.1ATP-binding cassette, subfamily C/ATP-binding cassette, subfamily C, CydC. (556 aa)    
Predicted Functional Partners:
SFQ42372.1
ATP-binding cassette, subfamily C/ATP-binding cassette, subfamily C, CydD.
 
 
0.999
SFQ45462.1
ATP-binding cassette, subfamily C, CydD/ATP-binding cassette, subfamily C, CydCD.
 
 
0.972
SFQ42356.1
Cytochrome bd-type quinol oxidase, subunit 2.
 
  
 0.967
SFQ42336.1
Cytochrome d ubiquinol oxidase subunit I.
  
 0.952
SFQ45475.1
Cytochrome d ubiquinol oxidase subunit II.
 
  
 0.940
SFQ59109.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.921
SFQ45489.1
Cytochrome d ubiquinol oxidase subunit I.
  
 0.914
SFP33048.1
Osmoprotectant transport system ATP-binding protein.
 
    
0.777
SFQ33672.1
Glutamate transport system ATP-binding protein.
 
    
0.771
SFQ42259.1
ATP-binding cassette, subfamily B.
 
  
 
0.573
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.