Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO96776.1 | SFQ51512.1 | SAMN05421810_101548 | SAMN05421810_108232 | Hypothetical protein. | Lysophospholipase L1. | 0.436 |
SFO96776.1 | SFQ54260.1 | SAMN05421810_101548 | SAMN05421810_10949 | Hypothetical protein. | Lysophospholipase L1. | 0.436 |
SFP95720.1 | SFQ51512.1 | SAMN05421810_1045 | SAMN05421810_108232 | Endo-1,4-beta-xylanase. | Lysophospholipase L1. | 0.730 |
SFP95720.1 | SFQ54260.1 | SAMN05421810_1045 | SAMN05421810_10949 | Endo-1,4-beta-xylanase. | Lysophospholipase L1. | 0.730 |
SFQ23750.1 | SFQ54260.1 | SAMN05421810_105300 | SAMN05421810_10949 | Transporter family-2 protein. | Lysophospholipase L1. | 0.576 |
SFQ51512.1 | SFO96776.1 | SAMN05421810_108232 | SAMN05421810_101548 | Lysophospholipase L1. | Hypothetical protein. | 0.436 |
SFQ51512.1 | SFP95720.1 | SAMN05421810_108232 | SAMN05421810_1045 | Lysophospholipase L1. | Endo-1,4-beta-xylanase. | 0.730 |
SFQ51512.1 | SFQ54260.1 | SAMN05421810_108232 | SAMN05421810_10949 | Lysophospholipase L1. | Lysophospholipase L1. | 0.731 |
SFQ51512.1 | SFQ55855.1 | SAMN05421810_108232 | SAMN05421810_109202 | Lysophospholipase L1. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.436 |
SFQ54239.1 | SFQ54249.1 | SAMN05421810_10947 | SAMN05421810_10948 | DNA-binding transcriptional regulator, HxlR family. | Drug resistance transporter, EmrB/QacA subfamily. | 0.575 |
SFQ54239.1 | SFQ54260.1 | SAMN05421810_10947 | SAMN05421810_10949 | DNA-binding transcriptional regulator, HxlR family. | Lysophospholipase L1. | 0.548 |
SFQ54249.1 | SFQ54239.1 | SAMN05421810_10948 | SAMN05421810_10947 | Drug resistance transporter, EmrB/QacA subfamily. | DNA-binding transcriptional regulator, HxlR family. | 0.575 |
SFQ54249.1 | SFQ54260.1 | SAMN05421810_10948 | SAMN05421810_10949 | Drug resistance transporter, EmrB/QacA subfamily. | Lysophospholipase L1. | 0.776 |
SFQ54260.1 | SFO96776.1 | SAMN05421810_10949 | SAMN05421810_101548 | Lysophospholipase L1. | Hypothetical protein. | 0.436 |
SFQ54260.1 | SFP95720.1 | SAMN05421810_10949 | SAMN05421810_1045 | Lysophospholipase L1. | Endo-1,4-beta-xylanase. | 0.730 |
SFQ54260.1 | SFQ23750.1 | SAMN05421810_10949 | SAMN05421810_105300 | Lysophospholipase L1. | Transporter family-2 protein. | 0.576 |
SFQ54260.1 | SFQ51512.1 | SAMN05421810_10949 | SAMN05421810_108232 | Lysophospholipase L1. | Lysophospholipase L1. | 0.731 |
SFQ54260.1 | SFQ54239.1 | SAMN05421810_10949 | SAMN05421810_10947 | Lysophospholipase L1. | DNA-binding transcriptional regulator, HxlR family. | 0.548 |
SFQ54260.1 | SFQ54249.1 | SAMN05421810_10949 | SAMN05421810_10948 | Lysophospholipase L1. | Drug resistance transporter, EmrB/QacA subfamily. | 0.776 |
SFQ54260.1 | SFQ55855.1 | SAMN05421810_10949 | SAMN05421810_109202 | Lysophospholipase L1. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.436 |
page 1 of 2