STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ63750.1MaoC like domain-containing protein. (135 aa)    
Predicted Functional Partners:
SFQ63768.1
Acyl dehydratase; Belongs to the UPF0336 family.
 
 0.999
SFQ00002.1
Acyl transferase domain-containing protein.
  
 0.887
SFQ69084.1
Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.882
SFO88816.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.876
SFQ69834.1
Acyl transferase domain-containing protein.
  
 0.858
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
 
  0.822
SFQ69824.1
Hypothetical protein.
  
 0.781
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
      0.755
SFQ64239.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.730
SFO86492.1
[acyl-carrier-protein] S-malonyltransferase.
  
  
 0.721
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.