STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ69812.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SFO89139.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
 0.811
SFP32938.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
 0.811
SFP97458.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  
 0.751
SFO88209.1
PKD domain-containing protein.
  
  
 0.735
SFQ69834.1
Acyl transferase domain-containing protein.
  
 
 0.694
SFP03335.1
F5/8 type C domain-containing protein.
     
 0.688
SFP37563.1
Hypothetical protein.
    
   0.650
SFP50476.1
Protein of unknown function.
    
  0.561
SFQ69824.1
Hypothetical protein.
       0.555
SFQ20233.1
Serine protease.
  
 0.542
Your Current Organism:
Yuhushiella deserti
NCBI taxonomy Id: 587909
Other names: CGMCC 4.5579, DSM 45648, JCM 16584, Pseudonocardiaceae bacterium RA45, Y. deserti, Yuhushiella deserti Mao et al. 2011, strain RA45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.