STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimG_1Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)    
Predicted Functional Partners:
APG50900.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.773
APG50902.1
Pilus assembly protein FimA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
fimD_2
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.757
focC_2-2
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.699
fimA_1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.406
Your Current Organism:
Providencia stuartii
NCBI taxonomy Id: 588
Other names: ATCC 29914, CCUG 14805, CDC 2896-68, CIP 104687, DSM 4539, LMG 3260, LMG:3260, NCTC 11800, P. stuartii, Proteus stuartii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.