STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966265_00429Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000966265_01421
Unannotated protein.
 
  
 0.778
GCA_000966265_00978
Unannotated protein.
  
 
 0.755
GCA_000966265_01250
Unannotated protein.
  
 
 0.753
GCA_000966265_01620
Unannotated protein.
 
 
 0.738
GCA_000966265_01325
Unannotated protein.
  
  
 
0.735
GCA_000966265_02343
Unannotated protein.
 
 
 0.734
GCA_000966265_00300
Unannotated protein.
 
  0.727
GCA_000966265_01402
Unannotated protein.
 
 
 0.716
GCA_000966265_00993
Unannotated protein.
 
 
 0.714
GCA_000966265_01092
Unannotated protein.
  
    0.713
Your Current Organism:
Palaeococcus ferrophilus
NCBI taxonomy Id: 588319
Other names: P. ferrophilus DSM 13482, Palaeococcus ferrophilus DMJ, Palaeococcus ferrophilus DSM 13482, Palaeococcus ferrophilus str. DSM 13482, Palaeococcus ferrophilus strain DSM 13482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.