STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966265_00893Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_000966265_00892
Unannotated protein.
    
 0.906
GCA_000966265_00348
Unannotated protein.
 
  
 0.838
GCA_000966265_00891
Unannotated protein.
  
  
 0.769
GCA_000966265_00668
Unannotated protein.
  
  
 0.667
GCA_000966265_00411
Unannotated protein.
  
     0.637
GCA_000966265_00894
Unannotated protein.
       0.598
GCA_000966265_02351
Unannotated protein.
 
     0.587
GCA_000966265_02350
Unannotated protein.
 
     0.579
GCA_000966265_00188
Unannotated protein.
  
     0.542
GCA_000966265_00904
Unannotated protein.
 
     0.539
Your Current Organism:
Palaeococcus ferrophilus
NCBI taxonomy Id: 588319
Other names: P. ferrophilus DSM 13482, Palaeococcus ferrophilus DMJ, Palaeococcus ferrophilus DSM 13482, Palaeococcus ferrophilus str. DSM 13482, Palaeococcus ferrophilus strain DSM 13482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.