STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966265_01513Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000966265_01511
Unannotated protein.
       0.866
GCA_000966265_01512
Unannotated protein.
       0.866
GCA_000966265_01515
Unannotated protein.
  
    0.745
GCA_000966265_01514
Unannotated protein.
       0.737
GCA_000966265_01517
Unannotated protein.
       0.722
GCA_000966265_01510
Unannotated protein.
       0.623
GCA_000966265_01518
Unannotated protein.
       0.610
GCA_000966265_01516
Unannotated protein.
       0.593
GCA_000966265_01519
Unannotated protein.
       0.564
GCA_000966265_01509
Unannotated protein.
       0.487
Your Current Organism:
Palaeococcus ferrophilus
NCBI taxonomy Id: 588319
Other names: P. ferrophilus DSM 13482, Palaeococcus ferrophilus DMJ, Palaeococcus ferrophilus DSM 13482, Palaeococcus ferrophilus str. DSM 13482, Palaeococcus ferrophilus strain DSM 13482
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.